#!/bin/bash -l ACCOUNT= # Enter account name PARTITION= # Enter partition # number of nodes NN= # Enter number of nodes NNHOST= # Enter number of processes per node (typically 1) #TIMEOUT="-t 10:00" WORKDIR= # Enter work directory; set a path that is writable by the compute nodes, # ${HOME} may be unavailable COMSOLDIR= # Enter COMSOL installation path # Use "module load comsol/5.5" + "which comsol" to figure out the installation path OUTDIR=${WORKDIR}/out # Enter output directory OUTLOG=${OUTDIR}/out.txt ERRLOG=${OUTDIR}/err.txt PREFSDIR=${WORKDIR}/prefs # Enter preferences directory DATADIR=${PREFSDIR}/data CONFDIR=${PREFSDIR}/configuration RECDIR=${WORKDIR}/recoveries TMPDIR=${WORKDIR}/tmp INFILE=${WORKDIR}/models/test.mph # Enter input file name OUTFILE=${OUTDIR}/test_out.mph mkdir -p ${OUTDIR} mkdir -p ${PREFSDIR} mkdir -p ${RECDIR} mkdir -p ${TMPDIR} sbatch -A ${ACCOUNT} ${TIMEOUT} -N ${NN} -p ${PARTITION} -o ${OUTLOG} -e ${ERRLOG} --export=FLROOT=${COMSOLDIR} \ ${COMSOLDIR}/bin/comsol batch \ -mpibootstrap slurm -nnhost ${NNHOST} -mpifabrics shm:tcp \ -inputfile ${INFILE} -outputfile ${OUTFILE} \ -prefsdir ${PREFSDIR} -configuration ${CONFDIR}/comsol_@process.id \ -data ${DATADIR}/comsol_@process.id \ -recoverydir ${RECDIR} -tmpdir ${TMPDIR}